Major Research Areas
Molecular Biology
Figure 14
Figure 14 Overexpression of SetB rescues the par phenotype of temperature-sensitive cells mutated in parC and grown at the nonpermissive temperature.

We isolated setB as a high-copy suppressor of the parC1215 mutation. This gene encodes an integral inner membrane protein that is predicted to have 10 membrane-spanning segments and an unprocessed signal sequence. Roughly co-incident with our finding of setB, another lab determined that it encoded a sugar (lactose and galactosides) efflux transporter; however, we have demonstrated that the transport activity is not required to suppress the parC1215 allele. Rescue of C600parC1215 by SetB was effected in an unusual manner. C600parC1215(pBRspcA), growing at 42°C after 2 h, appears identical to C600parC1215, that is, the cells display the classic par phenotype. Over the next 2 to 4 h of growth, the filaments and large nucleoids resolve, leaving a population that is 50 percent more or less normal looking cells and 50 percent anucleates (Figure 14).


Figure 15
Figure 15 Overexpression of SetB causes DNA stretching and breakage. (See text for details.)

Additional analysis demonstrated that manipulation of the level of expression of setB caused defects in chromosome dynamics. Particularly striking are the effects that occur when SetB is overexpressed in wild type cells (Figure 15).

Overproduction of SetB caused dramatic effects on chromosome segregation; essentially no cell had a normal appearance. In general, the cells were elongated with filamentation becoming obvious at the latter part of the growth phase, and the nucleoids appearing either stretched out or fragmented (Figure 15). The chromosomes often appeared as pairs, where one pair seemed to have been pulled away from the other pair (Figure 15b-3). In many instances, it looked as if the chromosomes comprising a pair had been stretched out parallel to each other (Figure 15b-7). Nucleoid fragmentation was the other predominate phenotype, which became more apparent later in the growth phase. Fragmented nucleoids appeared to have been pulled apart, with debris strewn throughout the longitudinal cross-section of the cell (Figures 15b-5 and 15d-1). Our current hypothesis is that SetB, either directly or indirectly, supports the establishment of a connection between the DNA and a force-generating apparatus in the cell. In this context, overproduction of SpcA could result in the application of either too much force or misapplied force to the sister chromosomes, causing them to decondense and, eventually, break apart.

Our proposal that SetB was involved in mediating the application of a force to the daughter chromosomes has gained credence from studies that have indicated that MreB, the bacterial actin ancestor, appears to be involved in chromosome segregation. Ken Geddes' group showed that overproduction of mutant MreB proteins that cannot hydrolyze ATP (and thus cannot form actin-like filaments in the cell) causes a par phenotype. In addition, ParM, a MreB-family protein encoded by the P1 plasmid, is required for plasmid segregation — a process that has been proposed to occur via attachment of the sister plasmid circles to ParM filaments that grow outward from the cell center. We have demonstrated, using 2-hybrid analysis, that SetB interacts with MreB. This represents the first report of a MreB-interacting protein.

Figure 16
Figure 16 MreB and SetB localize in the cell as helical filaments that appear intertwined. Overexpression of MreB causes slight filamentation, allowing us to clearly observe the helical nature of the filaments formed by MreB and SetB.

Furthermore, immuno-localization experiments demonstrated that like MreB, SetB exists in the cell as a filament (Figure 16), implying that there is a specific process acting to prevent uniform distribution of SetB throughout the inner membrane. Remarkably, the MreB and SetB filaments appear interwoven (examine the regions between the 2 white arrows in Figure 16). We are very excited by these observations. Our current hypothesis is that the MreB filament participates actively in chromosome segregation by, in some as yet unknown manner, applying a force that helps partition the daughter chromosomes to opposite halves of the cell. We think that SetB may be involved in either mediating attachment of the MreB filament to the cell membrane. We are actively investigating this model.

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