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Epidemiology & Biostatistics // Biostatistics

Biostatistics: Software

Bioequivalence
text/plain iconDownload WinBUGS code
Clonality Testing: Excel Macros
application/vnd.ms-excel iconDownload Excel file
Clonality Testing: R Package
Code to Implement the GEE Approach
application/pdf iconDownload code
Concordance Probability Estimate
application/zip iconDownload SAS code
application/zip iconDownload R library
Dose Response
application/octet-stream iconDownload SAS code
application/octet-stream iconDownload R code
EquiGeneNorm
text/plain iconDownload R function
Hybrid Bayesian Laplacian Approach
application/zip iconDownload SAS file
iCluster

A CRAN R Package for Integrative Clustering Based on Joint Analysis of Multiple Genome-scale Data Sets

application/octet-stream iconDownload iCluster R package
application/zip iconDownload CMM R code
application/zip iconDownload ELDA R code
iClusterPlus

Pattern discovery and cancer gene identification in integrated cancer genomic data.

application/pdf iconDownload iClusterPlus user guide
application/octet-stream iconDownload R package source file
Order Statistic Formulation of the Power of Two-Stage Genotyping with Fixed Sample Size
application/zip iconDownload zip file
R Functions to Build a Nomogram for Survey-Weighted Cox Models
text/plain iconDownload the R functions to build a nomogram for a survey-weighted Cox model
application/octet-stream iconDownload the Gastric cancer data used to illustrate the methods.
ROC Curves
text/plain iconDownload SAS code
application/octet-stream iconDownload R code
Significance Cut-offs for Two-Stage Association Studies
application/octet-stream iconDownload R code
Software for CNV Prediction
application/zip iconDownload zip file

analysis (uh-NA-lih-sis)

A process in which anything complex is separated into simple or less complex parts.
Source: The National Cancer Institute's Dictionary of Cancer Terms
(http://www.cancer.gov/dictionary)

cancer (KAN-ser)

A term for diseases in which abnormal cells divide without control and can invade nearby tissues. Cancer cells can also spread to other parts of the body through the blood and lymph systems. There are several main types of cancer. Carcinoma is a cancer that begins in the skin or in tissues that line or cover internal organs. Sarcoma is a cancer that begins in bone, cartilage, fat, muscle, blood vessels, or other connective or supportive tissue. Leukemia is a cancer that starts in blood-forming tissue such as the bone marrow, and causes large numbers of abnormal blood cells to be produced and enter the blood. Lymphoma and multiple myeloma are cancers that begin in the cells of the immune system. Central nervous system cancers are cancers that begin in the tissues of the brain and spinal cord. Also called malignancy.
Source: The National Cancer Institute's Dictionary of Cancer Terms
(http://www.cancer.gov/dictionary)

gene (jeen)

The functional and physical unit of heredity passed from parent to offspring. Genes are pieces of DNA, and most genes contain the information for making a specific protein.
Source: The National Cancer Institute's Dictionary of Cancer Terms
(http://www.cancer.gov/dictionary)

joint (joynt)

In medicine, the place where two or more bones are connected. Examples include the shoulder, elbow, knee, and jaw.
Source: The National Cancer Institute's Dictionary of Cancer Terms
(http://www.cancer.gov/dictionary)
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      • Concordance Probability Estimate
      • Dose Response
      • EquiGeneNorm
      • Hybrid Bayesian Laplacian Approach
      • iCluster
      • iClusterPlus
      • Order Statistic Formulation of the Power of Two-Stage Genotyping with Fixed Sample Size
      • R Functions to Build a Nomogram for Survey-Weighted Cox Models
      • ROC Curves
      • Significance Cut-offs for Two-Stage Association Studies
      • Software for CNV Prediction
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