Bayesian Cell Mixture Model (CMM)
This is a zip file containing R code embedding WINBUGS code to implement a Cell Mixture Model for Tissue Microarray (TMA) data analysis. The README file describes how to use the code. [download file]
Eigengene-based Linear Discriminant Analysis (ELDA)
This is a zip file containing R code to implement ELDA for tumor classification problems using gene expression microarray data. The README file describes how to use the code. [download file]
Reference: Shen et al. (2006) Eigengene-based linear discriminant model for tumor classification using gene expression microarray data.Bioinformatics. 22(21):2635-42.
R code and example for iCluster
[download file]
