Tamada M, Shi J, Bourdot KS, Supriyatno S, Palmquist KH, Gutierrez-Ruiz OL, Zallen JA. Toll receptors remodel epithelia by directing planar-polarized Src and PI3K activity. Developmental Cell. 2021; S1534-5807(21)00321-X.

Yu HH, Zallen JA. Abl and Canoe/Afadin mediate mechanotransduction at tricellular junctions. Science. 2020; 370(6520).

Brooks ER, Islam MT, Anderson KV, Zallen JA. Sonic hedgehog signaling directs patterned cell remodeling during cranial neural tube closure. Elife. 2020;9:e60234.

Paré AC, Zallen JA. Cellular, molecular, and biophysical control of epithelial cell intercalation. Curr Top Dev Biol. 2020;136:167-193. 

Paré AC, Naik P, Shi J, Mirman Z, Palmquist KH, Zallen JA. An LRR Receptor-Teneurin System Directs Planar Polarity at Compartment Boundaries. Dev Cell. 2019;51(2):208-221.e6. 

Kasza KE, Supriyatno S, Zallen JA. Cellular defects resulting from disease-related myosin II mutations in Drosophila. Proc Natl Acad Sci U S A. 2019;116(44):22205-22211. 

Razzell W, Bustillo ME, Zallen JA. The force-sensitive protein Ajuba regulates cell adhesion during epithelial morphogenesis. J Cell Biol. 2018;217(10):3715-3730.

Spencer AK, Schaumberg AJ, Zallen JA. Scaling of cytoskeletal organization with cell size in Drosophila. Mol Biol Cell. 2017;28(11):1519-1529. 

Farrell DL, Weitz O, Magnasco MO, Zallen JA. SEGGA: a toolset for rapid automated analysis of epithelial cell polarity and dynamics. Development. 2017;144(9):1725-1734.

Tamada M, Zallen JA. Square Cell Packing in the Drosophila Embryo through Spatiotemporally Regulated EGF Receptor Signaling. Dev Cell. 2015;35(2):151-61.

Vichas A, Laurie MT, Zallen JA. The Ski2-family helicase Obelus regulates Crumbs alternative splicing and cell polarity. J Cell Biol. 2015;211(5):1011-24. 

Paré AC, Vichas A, Fincher CT, Mirman Z, Farrell DL, Mainieri A, Zallen JA. A positional Toll receptor code directs convergent extension in Drosophila. Nature. 2014.

Kasza KE, Farrell DL, Zallen JA. Spatiotemporal control of epithelial remodeling by regulated myosin phosphorylation. PNAS. 2014; 111(32):11732-11737.

Simões S, Mainieri A, Zallen JA. Rho GTPase and Shroom direct planar polarized actomyosin contractility during convergent extension. J Cell Biol. 2014; 204(4):575-89.

Fernandez-Gonzalez R, Zallen JA. Wounded cells drive rapid epidermal repair in the early Drosophila embryo. Mol Biol Cell. 2013; 24(20):3227-3237.

Marcinkevicius E, Zallen JA. Regulation of cytoskeletal organization and junctional remodeling by the atypical cadherin Fat. Development. 2013; 140(2):433-43.

Tamada M, Farrell DL, Zallen JA. Abl Regulates Planar Polarized Junctional Dynamics through β-Catenin Tyrosine Phosphorylation. Dev Cell. 2012; 22:309-319.

Vichas A, Zallen JA. Translating cell polarity into tissue elongation. Semin Cell Dev Biol. 2011; 22(8):858-64.

Fernandez-Gonzalez R, Zallen JA. Oscillatory behaviors and hierarchical assembly of contractile structures in intercalating cells.Phys Biol. 2011;8(4):045005.

Nance J, Zallen JA. Elaborating polarity: PAR proteins and the cytoskeleton. Development. 2011;138:799-809.

Kasza KE, Zallen JA. Dynamics and regulation of contractile actin-myosin networks in morphogenesis. Curr Opin Cell Biol. 2011;23:30-38.

Simoes SD, Blankenship JT, Weitz O, Farrell DL, Tamada M, Fernandez-Gonzalez R, Zallen JA. Rho-kinase directs Bazooka/Par-3 planar polarity during Drosophila axis elongation. Developmental Cell 2010;19,377-388.

Wirtz-Peitz F, Zallen JA. Junctional trafficking and epithelial morphogenesis. Curr Opin Genet Dev. 2009;19:350-356.

Fernandez-Gonzalez R, Simoes Sde M, Röper JC, Eaton S, Zallen JA. Myosin II dynamics are regulated by tension in intercalating cells. Dev Cell. 2009;17:736-743.

Marcinkevicius E, Fernandez-Gonzalez R, Zallen JA. Quantitative approaches to planar polarity and tissue organization. J Biol. 2009;8:103.

Vichas A, Zallen JA. Deciphering the genetic code of morphogenesis using functional genomics. J Biol. 2009;8:76.

Fernandez-Gonzalez R, Zallen JA. Cell mechanics and feedback regulation of actomyosin networks. Sci Signal. 2009;2:pe78.

Zallen JA, Blankenship JT. Multicellular dynamics during epithelial elongation. Seminars in Cell and Developmental Biology. 2008;19:263-270.

Zallen JA. Planar polarity and tissue morphogenesis. Cell. 2007;129:1051-1063

Blankenship JT, Fuller MT, and Zallen JA. The Drosophila homolog of the Exo84 exocyst subunit promotes apical epithelial identity. J Cell Sci. 2007;120:3099-3110.

Blankenship JT, Backovic SB, Sanny JSP, Weitz O, and Zallen JA. Multicellular rosette formation links planar cell polarity to tissue morphogenesis. Dev Cell. 2006;11:459-470.

Zallen JA and Zallen R. Cell-pattern disordering during convergent extension in Drosophila. Journal of Physics: Condensed Matter. 2004;16:S5073-S5080.

Zallen JA and Wieschaus E. Patterned gene expression directs bipolar planar polarity in Drosophila. Dev Cell. 2004;6:343-355.

Zallen JA, Cohen Y, Hudson AM, Cooley L, Wieschaus E, and Schejter ED. SCAR is a primary regulator of Arp2/3-dependent morphological events in Drosophila. J Cell Biol. 2002;146:689-701.

Zallen JA, Peckol EL, Tobin DM, and Bargmann CI. Neuronal cell shape and neurite initiation are regulated by the Ndr kinase SAX-1, a member of the Orb6/COT-1/warts serine/threonine kinase family. Mol Biol Cell. 2000;11:3177-3190.

Peckol EL, Zallen JA, Yarrow JC, and Bargmann CI. Sensory activity affects sensory axon development in C. elegans. Development. 1999;126:1891-1902.

Zallen JA, Kirch SA, and Bargmann CI. Genes required for axon pathfinding and extension in the C. elegans nerve ring. Development. 1999;126:3679-3692.

Zallen JA, Yi BA, and Bargmann CI. The conserved immunoglobulin superfamily member SAX-3/Robo directs multiple aspects of axon guidance in C. elegans. Cell. 1998;92:217-227.